Genome Details
Selected Rep_genome_ID: HRGMv2_4626
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E fragi
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4626 | 4,992,346 | 95.9% | 0.595% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4626_CGC14 | CGCFAM_00018 | Yes | 8 | 3 | |
| HRGMv2_4626_CGC32 | CGCFAM_00474 | Yes | 4 | 1 | |
| HRGMv2_4626_CGC5 | CGCFAM_01364 | Yes | 9 | 1 | |
| HRGMv2_4626_CGC31 | CGCFAM_01454 | Yes | 4 | 1 | |
| HRGMv2_4626_CGC22 | CGCFAM_02711 | Yes | 4 | 1 | |
| HRGMv2_4626_CGC27 | CGCFAM_03308 | Yes | 9 | 1 | |
| HRGMv2_4626_CGC16 | CGCFAM_03893 | Yes | 4 | 1 | |
| HRGMv2_4626_CGC20 | CGCFAM_05744 | Yes | 6 | 2 | |
| HRGMv2_4626_CGC8 | CGCFAM_06213 | Yes | 4 | 1 | |
| HRGMv2_4626_CGC1 | CGCFAM_09158 | Yes | 4 | 1 | |
| HRGMv2_4626_CGC10 | CGCFAM_10349 | Yes | 13 | 3 | |
| HRGMv2_4626_CGC11 | CGCFAM_10653 | Yes | 3 | 1 |
Top CAZyme Families