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Cluster: HRGMv2_4626_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4626_5 HRGMv2_4626_5_13 9226 9504 + 2.A.64.1.1
pfam HRGMv2_4626_5 HRGMv2_4626_5_14 9515 9913 + TatA_B_E
TC HRGMv2_4626_5 HRGMv2_4626_5_15 9918 10715 + 2.A.64.1.1
pfam HRGMv2_4626_5 HRGMv2_4626_5_16 10712 11422 + Methyltrans_RNA
TC HRGMv2_4626_5 HRGMv2_4626_5_17 11576 13144 + 1.B.52.2.1
TC HRGMv2_4626_5 HRGMv2_4626_5_18 13262 13996 - 3.A.1.3.15
TC HRGMv2_4626_5 HRGMv2_4626_5_19 13989 14951 - 3.A.1.3.17
TC HRGMv2_4626_5 HRGMv2_4626_5_20 15056 15856 - 3.A.1.3.27
CAZyme HRGMv2_4626_5 HRGMv2_4626_5_21 16146 18698 - GT2
Gene ID: HRGMv2_4626_5_13
Type: TC
Location: 9226 - 9504 (+)
Gene ID: HRGMv2_4626_5_14
Type: pfam
Location: 9515 - 9913 (+)
Gene ID: HRGMv2_4626_5_15
Type: TC
Location: 9918 - 10715 (+)
Gene ID: HRGMv2_4626_5_16
Type: pfam
Location: 10712 - 11422 (+)
Gene ID: HRGMv2_4626_5_17
Type: TC
Location: 11576 - 13144 (+)
Gene ID: HRGMv2_4626_5_18
Type: TC
Location: 13262 - 13996 (-)
Gene ID: HRGMv2_4626_5_19
Type: TC
Location: 13989 - 14951 (-)
Gene ID: HRGMv2_4626_5_20
Type: TC
Location: 15056 - 15856 (-)
Gene ID: HRGMv2_4626_5_21
Type: CAZyme
Location: 16146 - 18698 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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