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Cluster: HRGMv2_4626_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4626_19 HRGMv2_4626_19_8 8015 8944 + GT2
pfam HRGMv2_4626_19 HRGMv2_4626_19_9 9002 9718 + Epimerase
CAZyme HRGMv2_4626_19 HRGMv2_4626_19_10 9715 10854 + GT4
TC HRGMv2_4626_19 HRGMv2_4626_19_11 10905 11939 + 9.B.18.2.1
pfam HRGMv2_4626_19 HRGMv2_4626_19_12 11942 13054 + Epimerase | Polysacc_synt_2 | NAD_binding_4 | Polysacc_synt_C
pfam HRGMv2_4626_19 HRGMv2_4626_19_13 13082 14212 + Epimerase_2
CAZyme HRGMv2_4626_19 HRGMv2_4626_19_14 14218 15438 + GT4
TC HRGMv2_4626_19 HRGMv2_4626_19_15 15597 16259 + 9.B.18.1.2
Gene ID: HRGMv2_4626_19_8
Type: CAZyme
Location: 8015 - 8944 (+)
Gene ID: HRGMv2_4626_19_9
Type: pfam
Location: 9002 - 9718 (+)
Gene ID: HRGMv2_4626_19_10
Type: CAZyme
Location: 9715 - 10854 (+)
Gene ID: HRGMv2_4626_19_11
Type: TC
Location: 10905 - 11939 (+)
Gene ID: HRGMv2_4626_19_12
Type: pfam
Location: 11942 - 13054 (+)
Gene ID: HRGMv2_4626_19_13
Type: pfam
Location: 13082 - 14212 (+)
Gene ID: HRGMv2_4626_19_14
Type: CAZyme
Location: 14218 - 15438 (+)
Gene ID: HRGMv2_4626_19_15
Type: TC
Location: 15597 - 16259 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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