Genome Details
Selected Rep_genome_ID: HRGMv2_4310
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4310 | 2,827,633 | 94.1% | 2.056% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4310_CGC3 | CGCFAM_00008 | Yes | 4 | 2 | |
| HRGMv2_4310_CGC6 | CGCFAM_00027 | Yes | 5 | 1 | |
| HRGMv2_4310_CGC1 | CGCFAM_00149 | Yes | 6 | 2 | |
| HRGMv2_4310_CGC15 | CGCFAM_00160 | Yes | 6 | 1 | alpha-glucan |
| HRGMv2_4310_CGC17 | CGCFAM_00190 | Yes | 5 | 1 | |
| HRGMv2_4310_CGC29 | CGCFAM_00412 | Yes | 4 | 1 | |
| HRGMv2_4310_CGC12 | CGCFAM_00527 | Yes | 3 | 1 | |
| HRGMv2_4310_CGC14 | CGCFAM_00573 | Yes | 4 | 1 | |
| HRGMv2_4310_CGC9 | CGCFAM_01684 | Yes | 5 | 1 | |
| HRGMv2_4310_CGC26 | CGCFAM_03809 | Yes | 6 | 1 | |
| HRGMv2_4310_CGC20 | CGCFAM_04932 | Yes | 4 | 1 | |
| HRGMv2_4310_CGC13 | CGCFAM_08823 | Yes | 3 | 1 |
Top CAZyme Families