Cluster: HRGMv2_4310_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4310
- CGC Family ID: CGCFAM_00527
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4310_24 | HRGMv2_4310_24_3 | 1199 | 2143 | + | GT2 |
| TF | HRGMv2_4310_24 | HRGMv2_4310_24_4 | 2234 | 2473 | + | HTH_3 |
| TC | HRGMv2_4310_24 | HRGMv2_4310_24_5 | 2537 | 4060 | - | 2.A.15.2.2 |
Gene ID: HRGMv2_4310_24_3
Type: CAZyme
Location: 1199 - 2143 (+)
Type: CAZyme
Location: 1199 - 2143 (+)
Gene ID: HRGMv2_4310_24_4
Type: TF
Location: 2234 - 2473 (+)
Type: TF
Location: 2234 - 2473 (+)
Gene ID: HRGMv2_4310_24_5
Type: TC
Location: 2537 - 4060 (-)
Type: TC
Location: 2537 - 4060 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.