Cluster: HRGMv2_4310_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4310
- CGC Family ID: CGCFAM_08823
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4310_25 | HRGMv2_4310_25_3 | 1813 | 2961 | + | GH18 |
| peptidase | HRGMv2_4310_25 | HRGMv2_4310_25_4 | 3076 | 4956 | - | C44.UNW |
| TC | HRGMv2_4310_25 | HRGMv2_4310_25_5 | 4971 | 6395 | - | 2.A.45.3.1 |
Gene ID: HRGMv2_4310_25_3
Type: CAZyme
Location: 1813 - 2961 (+)
Type: CAZyme
Location: 1813 - 2961 (+)
Gene ID: HRGMv2_4310_25_4
Type: peptidase
Location: 3076 - 4956 (-)
Type: peptidase
Location: 3076 - 4956 (-)
Gene ID: HRGMv2_4310_25_5
Type: TC
Location: 4971 - 6395 (-)
Type: TC
Location: 4971 - 6395 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.