Cluster: HRGMv2_4310_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4310
- CGC Family ID: CGCFAM_00573
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4310_25 | HRGMv2_4310_25_33 | 26299 | 28110 | - | 3.A.16.1.1 |
| NULL(UNKNOWN) | HRGMv2_4310_25 | HRGMv2_4310_25_34 | 28113 | 28562 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4310_25 | HRGMv2_4310_25_35 | 28780 | 29322 | - | TetR_N |
| CAZyme | HRGMv2_4310_25 | HRGMv2_4310_25_36 | 29444 | 29926 | + | GT8 |
Gene ID: HRGMv2_4310_25_33
Type: TC
Location: 26299 - 28110 (-)
Type: TC
Location: 26299 - 28110 (-)
Gene ID: HRGMv2_4310_25_34
Type:
Location: 28113 - 28562 (-)
Type:
Location: 28113 - 28562 (-)
Gene ID: HRGMv2_4310_25_35
Type: STP
Location: 28780 - 29322 (-)
Type: STP
Location: 28780 - 29322 (-)
Gene ID: HRGMv2_4310_25_36
Type: CAZyme
Location: 29444 - 29926 (+)
Type: CAZyme
Location: 29444 - 29926 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.