Cluster: HRGMv2_4310_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4310
- CGC Family ID: CGCFAM_00412
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4310_116 | HRGMv2_4310_116_3 | 2544 | 3842 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_4310_116 | HRGMv2_4310_116_4 | 3947 | 4432 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4310_116 | HRGMv2_4310_116_5 | 4767 | 5543 | - | 2.A.5.5.2 |
| TC | HRGMv2_4310_116 | HRGMv2_4310_116_6 | 5613 | 7004 | - | 2.A.35.1.2 |
Gene ID: HRGMv2_4310_116_3
Type: CAZyme
Location: 2544 - 3842 (+)
Type: CAZyme
Location: 2544 - 3842 (+)
Gene ID: HRGMv2_4310_116_4
Type:
Location: 3947 - 4432 (-)
Type:
Location: 3947 - 4432 (-)
Gene ID: HRGMv2_4310_116_5
Type: TC
Location: 4767 - 5543 (-)
Type: TC
Location: 4767 - 5543 (-)
Gene ID: HRGMv2_4310_116_6
Type: TC
Location: 5613 - 7004 (-)
Type: TC
Location: 5613 - 7004 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.