Cluster: HRGMv2_4310_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4310
- CGC Family ID: CGCFAM_03809
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4310_68 | HRGMv2_4310_68_8 | 7433 | 8851 | + | 2.A.118.1.5 |
| pfam | HRGMv2_4310_68 | HRGMv2_4310_68_9 | 8964 | 9899 | - | AA_kinase |
| peptidase | HRGMv2_4310_68 | HRGMv2_4310_68_10 | 10063 | 10851 | + | G05.UPW |
| CAZyme | HRGMv2_4310_68 | HRGMv2_4310_68_11 | 10848 | 11867 | + | GT2 |
| STP | HRGMv2_4310_68 | HRGMv2_4310_68_12 | 12138 | 12395 | + | PTS-HPr |
| TC | HRGMv2_4310_68 | HRGMv2_4310_68_13 | 12506 | 14161 | + | 8.A.7.1.1 |
Gene ID: HRGMv2_4310_68_8
Type: TC
Location: 7433 - 8851 (+)
Type: TC
Location: 7433 - 8851 (+)
Gene ID: HRGMv2_4310_68_9
Type: pfam
Location: 8964 - 9899 (-)
Type: pfam
Location: 8964 - 9899 (-)
Gene ID: HRGMv2_4310_68_10
Type: peptidase
Location: 10063 - 10851 (+)
Type: peptidase
Location: 10063 - 10851 (+)
Gene ID: HRGMv2_4310_68_11
Type: CAZyme
Location: 10848 - 11867 (+)
Type: CAZyme
Location: 10848 - 11867 (+)
Gene ID: HRGMv2_4310_68_12
Type: STP
Location: 12138 - 12395 (+)
Type: STP
Location: 12138 - 12395 (+)
Gene ID: HRGMv2_4310_68_13
Type: TC
Location: 12506 - 14161 (+)
Type: TC
Location: 12506 - 14161 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.