Genome Details
Selected Rep_genome_ID: HRGMv2_4238
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4238 | 3,588,303 | 97.14% | 1.932% | Italy(Sardinia) | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4238_CGC16 | CGCFAM_00002 | Yes | 5 | 3 | |
| HRGMv2_4238_CGC10 | CGCFAM_00015 | Yes | 9 | 6 | |
| HRGMv2_4238_CGC12 | CGCFAM_00021 | Yes | 5 | 2 | |
| HRGMv2_4238_CGC7 | CGCFAM_00078 | Yes | 6 | 3 | galactan |
| HRGMv2_4238_CGC21 | CGCFAM_00107 | Yes | 10 | 2 | beta-glucan |
| HRGMv2_4238_CGC14 | CGCFAM_00450 | Yes | 6 | 1 | |
| HRGMv2_4238_CGC31 | CGCFAM_00857 | Yes | 3 | 1 | |
| HRGMv2_4238_CGC3 | CGCFAM_00977 | Yes | 8 | 1 | |
| HRGMv2_4238_CGC17 | CGCFAM_01031 | Yes | 4 | 2 | |
| HRGMv2_4238_CGC15 | CGCFAM_01273 | Yes | 3 | 1 | |
| HRGMv2_4238_CGC25 | CGCFAM_01405 | Yes | 8 | 1 | |
| HRGMv2_4238_CGC30 | CGCFAM_04593 | Yes | 6 | 1 | |
| HRGMv2_4238_CGC18 | CGCFAM_04763 | Yes | 4 | 1 | |
| HRGMv2_4238_CGC5 | CGCFAM_07007 | Yes | 6 | 1 | |
| HRGMv2_4238_CGC11 | CGCFAM_08721 | Yes | 17 | 3 |
Top CAZyme Families