Cluster: HRGMv2_4238_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4238
- CGC Family ID: CGCFAM_00450
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4238_14 | HRGMv2_4238_14_7 | 7170 | 8531 | + | 9.B.18.1.3 |
| CAZyme | HRGMv2_4238_14 | HRGMv2_4238_14_8 | 8542 | 9363 | + | GT2 |
| pfam | HRGMv2_4238_14 | HRGMv2_4238_14_9 | 9434 | 10213 | + | LicD |
| pfam | HRGMv2_4238_14 | HRGMv2_4238_14_10 | 10210 | 11508 | + | Glyphos_transf |
| TC | HRGMv2_4238_14 | HRGMv2_4238_14_11 | 11505 | 12281 | + | 3.A.1.103.1 |
| TC | HRGMv2_4238_14 | HRGMv2_4238_14_12 | 12294 | 13040 | + | 3.A.1.103.5 |
Gene ID: HRGMv2_4238_14_7
Type: TC
Location: 7170 - 8531 (+)
Type: TC
Location: 7170 - 8531 (+)
Gene ID: HRGMv2_4238_14_8
Type: CAZyme
Location: 8542 - 9363 (+)
Type: CAZyme
Location: 8542 - 9363 (+)
Gene ID: HRGMv2_4238_14_9
Type: pfam
Location: 9434 - 10213 (+)
Type: pfam
Location: 9434 - 10213 (+)
Gene ID: HRGMv2_4238_14_10
Type: pfam
Location: 10210 - 11508 (+)
Type: pfam
Location: 10210 - 11508 (+)
Gene ID: HRGMv2_4238_14_11
Type: TC
Location: 11505 - 12281 (+)
Type: TC
Location: 11505 - 12281 (+)
Gene ID: HRGMv2_4238_14_12
Type: TC
Location: 12294 - 13040 (+)
Type: TC
Location: 12294 - 13040 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.