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Cluster: HRGMv2_4238_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4238_9 HRGMv2_4238_9_9 8538 10064 - 2.A.66.1.40
CAZyme HRGMv2_4238_9 HRGMv2_4238_9_10 10066 11094 - GT2
CAZyme HRGMv2_4238_9 HRGMv2_4238_9_11 11232 12398 + GT4
CAZyme HRGMv2_4238_9 HRGMv2_4238_9_12 12403 13296 - GT14
CAZyme HRGMv2_4238_9 HRGMv2_4238_9_13 13313 14287 - GT2
pfam HRGMv2_4238_9 HRGMv2_4238_9_14 14334 15377 - Acyl_transf_3
pfam HRGMv2_4238_9 HRGMv2_4238_9_15 15436 15792 - DUF2304
CAZyme HRGMv2_4238_9 HRGMv2_4238_9_16 15805 16494 - GT2
CAZyme HRGMv2_4238_9 HRGMv2_4238_9_17 16503 17327 - GT2
Gene ID: HRGMv2_4238_9_9
Type: TC
Location: 8538 - 10064 (-)
Gene ID: HRGMv2_4238_9_10
Type: CAZyme
Location: 10066 - 11094 (-)
Gene ID: HRGMv2_4238_9_11
Type: CAZyme
Location: 11232 - 12398 (+)
Gene ID: HRGMv2_4238_9_12
Type: CAZyme
Location: 12403 - 13296 (-)
Gene ID: HRGMv2_4238_9_13
Type: CAZyme
Location: 13313 - 14287 (-)
Gene ID: HRGMv2_4238_9_14
Type: pfam
Location: 14334 - 15377 (-)
Gene ID: HRGMv2_4238_9_15
Type: pfam
Location: 15436 - 15792 (-)
Gene ID: HRGMv2_4238_9_16
Type: CAZyme
Location: 15805 - 16494 (-)
Gene ID: HRGMv2_4238_9_17
Type: CAZyme
Location: 16503 - 17327 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
14-2
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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