Cluster: HRGMv2_4238_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4238
- CGC Family ID: CGCFAM_01273
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4238_14 | HRGMv2_4238_14_20 | 22143 | 23423 | + | GT2 |
| pfam | HRGMv2_4238_14 | HRGMv2_4238_14_21 | 23458 | 23682 | + | PP-binding |
| TC | HRGMv2_4238_14 | HRGMv2_4238_14_22 | 23692 | 25728 | + | 4.C.1.1.7 |
Gene ID: HRGMv2_4238_14_20
Type: CAZyme
Location: 22143 - 23423 (+)
Type: CAZyme
Location: 22143 - 23423 (+)
Gene ID: HRGMv2_4238_14_21
Type: pfam
Location: 23458 - 23682 (+)
Type: pfam
Location: 23458 - 23682 (+)
Gene ID: HRGMv2_4238_14_22
Type: TC
Location: 23692 - 25728 (+)
Type: TC
Location: 23692 - 25728 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.