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Cluster: HRGMv2_4238_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4238_23 HRGMv2_4238_23_19 25326 26126 + 9.B.34.1.3
TF HRGMv2_4238_23 HRGMv2_4238_23_20 26150 27718 - HTH_AraC | HTH_AraC
TC HRGMv2_4238_23 HRGMv2_4238_23_21 27722 29458 - 8.A.59.2.1
TC HRGMv2_4238_23 HRGMv2_4238_23_22 29609 30970 + 3.A.1.1.28
TC HRGMv2_4238_23 HRGMv2_4238_23_23 31054 31962 + 3.A.1.1.20
TC HRGMv2_4238_23 HRGMv2_4238_23_24 31962 32828 + 3.A.1.1.45
CAZyme HRGMv2_4238_23 HRGMv2_4238_23_25 32914 35202 + GH106
TC HRGMv2_4238_23 HRGMv2_4238_23_26 35394 36506 + 3.A.1.1.26
Gene ID: HRGMv2_4238_23_19
Type: TC
Location: 25326 - 26126 (+)
Gene ID: HRGMv2_4238_23_20
Type: TF
Location: 26150 - 27718 (-)
Gene ID: HRGMv2_4238_23_21
Type: TC
Location: 27722 - 29458 (-)
Gene ID: HRGMv2_4238_23_22
Type: TC
Location: 29609 - 30970 (+)
Gene ID: HRGMv2_4238_23_23
Type: TC
Location: 31054 - 31962 (+)
Gene ID: HRGMv2_4238_23_24
Type: TC
Location: 31962 - 32828 (+)
Gene ID: HRGMv2_4238_23_25
Type: CAZyme
Location: 32914 - 35202 (+)
Gene ID: HRGMv2_4238_23_26
Type: TC
Location: 35394 - 36506 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
14-2
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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