Cluster: HRGMv2_4238_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: galactan
- Genome ID: HRGMv2_4238
- CGC Family ID: CGCFAM_00078
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4238_8 | HRGMv2_4238_8_24 | 25490 | 27493 | + | GH2 |
| CAZyme | HRGMv2_4238_8 | HRGMv2_4238_8_25 | 27506 | 30496 | + | GH3 |
| TC | HRGMv2_4238_8 | HRGMv2_4238_8_26 | 30525 | 32072 | + | 2.A.2.3.2 |
| TF | HRGMv2_4238_8 | HRGMv2_4238_8_27 | 32201 | 33292 | - | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4238_8 | HRGMv2_4238_8_28 | 33440 | 34741 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4238_8 | HRGMv2_4238_8_29 | 34856 | 36208 | + | GH1 |
Gene ID: HRGMv2_4238_8_24
Type: CAZyme
Location: 25490 - 27493 (+)
Type: CAZyme
Location: 25490 - 27493 (+)
Gene ID: HRGMv2_4238_8_25
Type: CAZyme
Location: 27506 - 30496 (+)
Type: CAZyme
Location: 27506 - 30496 (+)
Gene ID: HRGMv2_4238_8_26
Type: TC
Location: 30525 - 32072 (+)
Type: TC
Location: 30525 - 32072 (+)
Gene ID: HRGMv2_4238_8_27
Type: TF
Location: 32201 - 33292 (-)
Type: TF
Location: 32201 - 33292 (-)
Gene ID: HRGMv2_4238_8_28
Type:
Location: 33440 - 34741 (+)
Type:
Location: 33440 - 34741 (+)
Gene ID: HRGMv2_4238_8_29
Type: CAZyme
Location: 34856 - 36208 (+)
Type: CAZyme
Location: 34856 - 36208 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.