PROTEIN: HRGMv2_4238_8_28
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Protein File & Metadata
Source:
HRGMv2_4238_8_28.pdb
Genome ID:
Protein ID:
HRGMv2_4238_8_28
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Protein Sequence
MKFKSLKKVL ALAMVAVMSV GCLSACGGNK AEQSGAESGQ EQQAQENEAQ GSEAQGSGES 60 TEAAEGTDAA ATAEGGTIMW LSNLSSGAQY EACLAYAEYV CGELGYKLEV VYGDAFNDPA 120 GNLSAVKNAM TDDVVGIMAS QDGGIINIME EYPEVYVAGY NSDMAAVYGE GGASAAAATN 180 DHFLGTIADG FVSGVDDGKR YAEVVIANGY KKVSTMIFPQ YAYPQAAIGD AAFREAIAEY 240 NATAEEPIEI VGDAKVLEFA PLEESYFLEE GHADLDCIVA MCAGVSFVYP ALTAAKAGGT 300 CSADTKMLTA GYEEDSSIQA DTGGEGTIQY IHISATENIA YAICLLDAAI SGTMYADYTA 360 SEPINGLLYE IDSADDQANT IAKSVLGTKN AADSPLTIDE IKEVLPRFNS EATYAGLKEL 420 FASEQLTADY LAQ 433
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EV98-F1-model_v4 | 68 | 409 | 26 | 338 | 0.6573 |
0.8076 |
| AF-P39265-F1-model_v4 | 73 | 373 | 22 | 311 | 0.6333 |
0.7987 |
| AF-A0A0H3H0T6-F1-model_v4 | 68 | 432 | 29 | 342 | 0.6315 |
0.7775 |
| AF-K0EWW3-F1-model_v4 | 73 | 394 | 46 | 331 | 0.6105 |
0.8041 |
| AF-K0EJ32-F1-model_v4 | 73 | 432 | 33 | 359 | 0.6018 |
0.7328 |
| AF-K0EXB1-F1-model_v4 | 64 | 376 | 26 | 330 | 0.5715 |
0.7446 |
| AF-Q12879-F1-model_v4 | 74 | 380 | 33 | 375 | 0.3032 |
0.6281 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1H2L9Q7-F1-model_v4 | CBM66 , GH32 | 5 | 394 | 44 | 1025 | 0.4469 |
0.6906 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1H2L9Q7 | CBM66 , GH32 | 5 | 394 | 44 | 1025 | 0.4469 |
0.6906 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3h75-assembly1.cif.gz_A | 73 | 433 | 1 | 328 | 0.7021 |
0.8139 |
| 4kq9-assembly1.cif.gz_A | 73 | 431 | 5 | 298 | 0.6838 |
0.8337 |
| 4ry0-assembly1.cif.gz_A | 72 | 431 | 1 | 287 | 0.6796 |
0.831 |
| 5dte-assembly3.cif.gz_C | 73 | 380 | 1 | 286 | 0.6774 |
0.8293 |
| 2rjo-assembly1.cif.gz_A | 73 | 423 | 1 | 316 | 0.6737 |
0.8017 |
| 5dte-assembly4.cif.gz_D | 73 | 380 | 1 | 281 | 0.6729 |
0.8295 |
| 5dkv-assembly4.cif.gz_D | 73 | 389 | 1 | 298 | 0.6707 |
0.8078 |
| 1tm2-assembly1.cif.gz_A | 74 | 387 | 1 | 314 | 0.6703 |
0.7889 |
| 2fn9-assembly2.cif.gz_B | 76 | 374 | 1 | 280 | 0.67 |
0.8261 |
| 3o1i-assembly1.cif.gz_C | 73 | 391 | 1 | 295 | 0.6684 |
0.8131 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0QYB3-F1-model_v4 | 69 | 430 | 28 | 346 | 0.6578 |
0.8065 |
| AF-A0QYB5-F1-model_v4 | 70 | 430 | 29 | 346 | 0.6566 |
0.8076 |
| AF-P39265-F1-model_v4 | 73 | 373 | 22 | 311 | 0.6333 |
0.7987 |
| AF-Q8G848-F1-model_v4 | 71 | 387 | 32 | 327 | 0.6275 |
0.7972 |
| AF-A9MZG4-F1-model_v4 | 72 | 386 | 24 | 340 | 0.618 |
0.7569 |
| AF-Q8Z2X8-F1-model_v4 | 72 | 386 | 24 | 340 | 0.6177 |
0.7566 |
| AF-Q1C135-F1-model_v4 | 72 | 386 | 23 | 339 | 0.6175 |
0.7552 |
| AF-Q5PJE4-F1-model_v4 | 72 | 386 | 24 | 340 | 0.6174 |
0.7563 |
| AF-B2K3F8-F1-model_v4 | 72 | 386 | 23 | 339 | 0.6171 |
0.7548 |
| AF-P76142-F1-model_v4 | 72 | 386 | 24 | 340 | 0.6165 |
0.7552 |