Cluster: HRGMv2_4238_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4238
- CGC Family ID: CGCFAM_07007
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4238_5 | HRGMv2_4238_5_81 | 75242 | 76429 | + | 2.A.37.2.2 |
| TC | HRGMv2_4238_5 | HRGMv2_4238_5_82 | 76546 | 77925 | - | 2.A.66.1.33 |
| CAZyme | HRGMv2_4238_5 | HRGMv2_4238_5_83 | 78052 | 81162 | - | GH2 |
| TC | HRGMv2_4238_5 | HRGMv2_4238_5_84 | 81180 | 83396 | - | 3.A.7.7.1 |
| TC | HRGMv2_4238_5 | HRGMv2_4238_5_85 | 83454 | 85298 | - | 3.A.1.135.5 |
| TC | HRGMv2_4238_5 | HRGMv2_4238_5_86 | 85298 | 87043 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_4238_5_81
Type: TC
Location: 75242 - 76429 (+)
Type: TC
Location: 75242 - 76429 (+)
Gene ID: HRGMv2_4238_5_82
Type: TC
Location: 76546 - 77925 (-)
Type: TC
Location: 76546 - 77925 (-)
Gene ID: HRGMv2_4238_5_83
Type: CAZyme
Location: 78052 - 81162 (-)
Type: CAZyme
Location: 78052 - 81162 (-)
Gene ID: HRGMv2_4238_5_84
Type: TC
Location: 81180 - 83396 (-)
Type: TC
Location: 81180 - 83396 (-)
Gene ID: HRGMv2_4238_5_85
Type: TC
Location: 83454 - 85298 (-)
Type: TC
Location: 83454 - 85298 (-)
Gene ID: HRGMv2_4238_5_86
Type: TC
Location: 85298 - 87043 (-)
Type: TC
Location: 85298 - 87043 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.