Cluster: HRGMv2_4238_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4238
- CGC Family ID: CGCFAM_00002
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4238_14 | HRGMv2_4238_14_50 | 56138 | 57610 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_4238_14 | HRGMv2_4238_14_51 | 57663 | 57866 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4238_14 | HRGMv2_4238_14_52 | 57890 | 59308 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_4238_14 | HRGMv2_4238_14_53 | 59305 | 60069 | + | GT2 |
| CAZyme | HRGMv2_4238_14 | HRGMv2_4238_14_54 | 60063 | 60806 | + | GT2 |
Gene ID: HRGMv2_4238_14_50
Type: CAZyme
Location: 56138 - 57610 (+)
Type: CAZyme
Location: 56138 - 57610 (+)
Gene ID: HRGMv2_4238_14_51
Type:
Location: 57663 - 57866 (+)
Type:
Location: 57663 - 57866 (+)
Gene ID: HRGMv2_4238_14_52
Type: TC
Location: 57890 - 59308 (+)
Type: TC
Location: 57890 - 59308 (+)
Gene ID: HRGMv2_4238_14_53
Type: CAZyme
Location: 59305 - 60069 (+)
Type: CAZyme
Location: 59305 - 60069 (+)
Gene ID: HRGMv2_4238_14_54
Type: CAZyme
Location: 60063 - 60806 (+)
Type: CAZyme
Location: 60063 - 60806 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.