Cluster: HRGMv2_4238_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4238
- CGC Family ID: CGCFAM_01031
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4238_16 | HRGMv2_4238_16_37 | 24323 | 24943 | - | 1.A.16.5.2 |
| pfam | HRGMv2_4238_16 | HRGMv2_4238_16_38 | 25127 | 26332 | - | UDPGP |
| CAZyme | HRGMv2_4238_16 | HRGMv2_4238_16_39 | 26478 | 28181 | - | CBM91 | GH43_12 |
| CAZyme | HRGMv2_4238_16 | HRGMv2_4238_16_40 | 28267 | 30426 | - | GH3 |
Gene ID: HRGMv2_4238_16_37
Type: TC
Location: 24323 - 24943 (-)
Type: TC
Location: 24323 - 24943 (-)
Gene ID: HRGMv2_4238_16_38
Type: pfam
Location: 25127 - 26332 (-)
Type: pfam
Location: 25127 - 26332 (-)
Gene ID: HRGMv2_4238_16_39
Type: CAZyme
Location: 26478 - 28181 (-)
Type: CAZyme
Location: 26478 - 28181 (-)
Gene ID: HRGMv2_4238_16_40
Type: CAZyme
Location: 28267 - 30426 (-)
Type: CAZyme
Location: 28267 - 30426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
14-2
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.