Genome Details
Selected Rep_genome_ID: HRGMv2_2819
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium merdipullorum
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A43.CMAG_4 | 2,759,985 | 97.96% | 1.36% | China(Inner Mongolia) | Asia | IMGG |
| CGMR012241 | 2,167,233 | 92.93% | 0.85% | China | Asia | CGMR |
| HRGMv2_2819 | 2,423,666 | 98.63% | 0.68% | South Korea | Asia | HRGM |
| MGYG000002155 | 2,379,587 | 97.96% | 0.68% | Germany | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2819_CGC19 | CGCFAM_00004 | Yes | 6 | 2 | alpha-glucan |
| HRGMv2_2819_CGC21 | CGCFAM_00007 | Yes | 8 | 3 | |
| HRGMv2_2819_CGC24 | CGCFAM_00018 | Yes | 9 | 2 | |
| HRGMv2_2819_CGC18 | CGCFAM_00073 | Yes | 4 | 2 | |
| HRGMv2_2819_CGC9 | CGCFAM_00266 | Yes | 5 | 1 | |
| HRGMv2_2819_CGC16 | CGCFAM_01281 | Yes | 3 | 1 | |
| HRGMv2_2819_CGC6 | CGCFAM_02174 | Yes | 3 | 1 | |
| HRGMv2_2819_CGC10 | CGCFAM_03425 | Yes | 4 | 1 | |
| HRGMv2_2819_CGC8 | CGCFAM_04928 | Yes | 3 | 1 | |
| HRGMv2_2819_CGC11 | CGCFAM_05834 | Yes | 4 | 1 | |
| HRGMv2_2819_CGC3 | CGCFAM_07005 | Yes | 5 | 2 | |
| HRGMv2_2819_CGC15 | CGCFAM_07464 | Yes | 7 | 1 | |
| HRGMv2_2819_CGC1 | CGCFAM_08184 | Yes | 7 | 1 | |
| HRGMv2_2819_CGC23 | CGCFAM_10187 | Yes | 7 | 1 | |
| HRGMv2_2819_CGC4 | CGCFAM_10188 | Yes | 9 | 1 | |
| HRGMv2_2819_CGC5 | CGCFAM_10189 | Yes | 8 | 1 |
Top CAZyme Families