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Cluster: HRGMv2_2819_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2819_11 HRGMv2_2819_11_32 29384 30358 - 3.A.1.5.20
TC HRGMv2_2819_11 HRGMv2_2819_11_33 30361 31362 - 3.A.1.5.2
TC HRGMv2_2819_11 HRGMv2_2819_11_34 31368 32384 - 3.A.1.5.2
TC HRGMv2_2819_11 HRGMv2_2819_11_35 32389 33333 - 3.A.1.5.2
TC HRGMv2_2819_11 HRGMv2_2819_11_36 33587 35278 - 3.A.1.5.2
TC HRGMv2_2819_11 HRGMv2_2819_11_37 35742 37301 - 2.A.35.2.1
CAZyme HRGMv2_2819_11 HRGMv2_2819_11_38 37621 42156 - GH25
Gene ID: HRGMv2_2819_11_32
Type: TC
Location: 29384 - 30358 (-)
Gene ID: HRGMv2_2819_11_33
Type: TC
Location: 30361 - 31362 (-)
Gene ID: HRGMv2_2819_11_34
Type: TC
Location: 31368 - 32384 (-)
Gene ID: HRGMv2_2819_11_35
Type: TC
Location: 32389 - 33333 (-)
Gene ID: HRGMv2_2819_11_36
Type: TC
Location: 33587 - 35278 (-)
Gene ID: HRGMv2_2819_11_37
Type: TC
Location: 35742 - 37301 (-)
Gene ID: HRGMv2_2819_11_38
Type: CAZyme
Location: 37621 - 42156 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2819_11_37 vegetarian > vegan 1.02931 0.02258

🧭 Explore Read Mapping of CGC

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