Cluster: HRGMv2_2819_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2819
- CGC Family ID: CGCFAM_07005
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2819_13 | HRGMv2_2819_13_91 | 74066 | 75019 | + | 3.A.1.34.1 |
| TC | HRGMv2_2819_13 | HRGMv2_2819_13_92 | 75012 | 75806 | + | 3.A.1.34.1 |
| CAZyme | HRGMv2_2819_13 | HRGMv2_2819_13_93 | 75948 | 76757 | - | CE4 |
| pfam | HRGMv2_2819_13 | HRGMv2_2819_13_94 | 76856 | 78163 | + | RmuC |
| CAZyme | HRGMv2_2819_13 | HRGMv2_2819_13_95 | 78763 | 79989 | + | GH3 |
Gene ID: HRGMv2_2819_13_91
Type: TC
Location: 74066 - 75019 (+)
Type: TC
Location: 74066 - 75019 (+)
Gene ID: HRGMv2_2819_13_92
Type: TC
Location: 75012 - 75806 (+)
Type: TC
Location: 75012 - 75806 (+)
Gene ID: HRGMv2_2819_13_93
Type: CAZyme
Location: 75948 - 76757 (-)
Type: CAZyme
Location: 75948 - 76757 (-)
Gene ID: HRGMv2_2819_13_94
Type: pfam
Location: 76856 - 78163 (+)
Type: pfam
Location: 76856 - 78163 (+)
Gene ID: HRGMv2_2819_13_95
Type: CAZyme
Location: 78763 - 79989 (+)
Type: CAZyme
Location: 78763 - 79989 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.