Cluster: HRGMv2_2819_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2819
- CGC Family ID: CGCFAM_03425
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2819_22 | HRGMv2_2819_22_101 | 107883 | 108953 | - | GT2 |
| TC | HRGMv2_2819_22 | HRGMv2_2819_22_102 | 108922 | 111327 | - | 3.A.3.23.2 |
| TC | HRGMv2_2819_22 | HRGMv2_2819_22_103 | 111410 | 111739 | - | 2.A.78.1.1 |
| TC | HRGMv2_2819_22 | HRGMv2_2819_22_104 | 111736 | 112434 | - | 2.A.78.1.1 |
Gene ID: HRGMv2_2819_22_101
Type: CAZyme
Location: 107883 - 108953 (-)
Type: CAZyme
Location: 107883 - 108953 (-)
Gene ID: HRGMv2_2819_22_102
Type: TC
Location: 108922 - 111327 (-)
Type: TC
Location: 108922 - 111327 (-)
Gene ID: HRGMv2_2819_22_103
Type: TC
Location: 111410 - 111739 (-)
Type: TC
Location: 111410 - 111739 (-)
Gene ID: HRGMv2_2819_22_104
Type: TC
Location: 111736 - 112434 (-)
Type: TC
Location: 111736 - 112434 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2819_22_103 | vegetarian > vegan | 1.23661 | 0.02258 |