Cluster: HRGMv2_2819_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2819
- CGC Family ID: CGCFAM_01281
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2819_32 | HRGMv2_2819_32_16 | 15116 | 16618 | + | 3.A.1.2.6 |
| TC | HRGMv2_2819_32 | HRGMv2_2819_32_17 | 16611 | 17600 | + | 3.A.1.2.13 |
| CAZyme | HRGMv2_2819_32 | HRGMv2_2819_32_18 | 17646 | 18686 | + | GH179 |
Gene ID: HRGMv2_2819_32_16
Type: TC
Location: 15116 - 16618 (+)
Type: TC
Location: 15116 - 16618 (+)
Gene ID: HRGMv2_2819_32_17
Type: TC
Location: 16611 - 17600 (+)
Type: TC
Location: 16611 - 17600 (+)
Gene ID: HRGMv2_2819_32_18
Type: CAZyme
Location: 17646 - 18686 (+)
Type: CAZyme
Location: 17646 - 18686 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.