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Cluster: HRGMv2_2819_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2819_37 HRGMv2_2819_37_1 102 824 - GT51
pfam HRGMv2_2819_37 HRGMv2_2819_37_2 1069 1182 - RUBY_RBDX
pfam HRGMv2_2819_37 HRGMv2_2819_37_3 1275 2471 - Flavodoxin_1 | Lactamase_B | ODP
TC HRGMv2_2819_37 HRGMv2_2819_37_4 2585 4165 - 1.I.1.1.3
TC HRGMv2_2819_37 HRGMv2_2819_37_5 4295 5164 + 2.A.115.1.2
TC HRGMv2_2819_37 HRGMv2_2819_37_6 5408 5992 + 2.A.107.1.2
TC HRGMv2_2819_37 HRGMv2_2819_37_7 6150 7559 + 2.A.22.5.3
Gene ID: HRGMv2_2819_37_1
Type: CAZyme
Location: 102 - 824 (-)
Gene ID: HRGMv2_2819_37_2
Type: pfam
Location: 1069 - 1182 (-)
Gene ID: HRGMv2_2819_37_3
Type: pfam
Location: 1275 - 2471 (-)
Gene ID: HRGMv2_2819_37_4
Type: TC
Location: 2585 - 4165 (-)
Gene ID: HRGMv2_2819_37_5
Type: TC
Location: 4295 - 5164 (+)
Gene ID: HRGMv2_2819_37_6
Type: TC
Location: 5408 - 5992 (+)
Gene ID: HRGMv2_2819_37_7
Type: TC
Location: 6150 - 7559 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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