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Cluster: HRGMv2_2819_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2819_35 HRGMv2_2819_35_126 139848 141260 + 9.B.18.1.2
CAZyme HRGMv2_2819_35 HRGMv2_2819_35_127 141262 142368 + GT4
NULL(UNKNOWN) HRGMv2_2819_35 HRGMv2_2819_35_128 142365 142922 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2819_35 HRGMv2_2819_35_129 142928 144031 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2819_35 HRGMv2_2819_35_130 144033 145067 + GT4
pfam HRGMv2_2819_35 HRGMv2_2819_35_131 145094 146197 + Glycos_transf_1 | Glyco_trans_1_4
pfam HRGMv2_2819_35 HRGMv2_2819_35_132 146187 147512 + UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_2819_35 HRGMv2_2819_35_133 147515 148591 + GH177
Gene ID: HRGMv2_2819_35_126
Type: TC
Location: 139848 - 141260 (+)
Gene ID: HRGMv2_2819_35_127
Type: CAZyme
Location: 141262 - 142368 (+)
Gene ID: HRGMv2_2819_35_128
Type:
Location: 142365 - 142922 (+)
Gene ID: HRGMv2_2819_35_129
Type:
Location: 142928 - 144031 (+)
Gene ID: HRGMv2_2819_35_130
Type: CAZyme
Location: 144033 - 145067 (+)
Gene ID: HRGMv2_2819_35_131
Type: pfam
Location: 145094 - 146197 (+)
Gene ID: HRGMv2_2819_35_132
Type: pfam
Location: 146187 - 147512 (+)
Gene ID: HRGMv2_2819_35_133
Type: CAZyme
Location: 147515 - 148591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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