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Cluster: HRGMv2_2819_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2819_29 HRGMv2_2819_29_119 115146 116276 - CE9
pfam HRGMv2_2819_29 HRGMv2_2819_29_120 116665 118023 - VWA | VWA_2
STP HRGMv2_2819_29 HRGMv2_2819_29_121 118354 119517 + Aminotran_1_2
TC HRGMv2_2819_29 HRGMv2_2819_29_122 119909 122092 + 3.A.24.1.1
TC HRGMv2_2819_29 HRGMv2_2819_29_123 122264 123589 - 2.A.66.1.26
pfam HRGMv2_2819_29 HRGMv2_2819_29_124 123973 124485 - Ferritin
TC HRGMv2_2819_29 HRGMv2_2819_29_125 124583 125443 - 2.A.119.2.1
Gene ID: HRGMv2_2819_29_119
Type: CAZyme
Location: 115146 - 116276 (-)
Gene ID: HRGMv2_2819_29_120
Type: pfam
Location: 116665 - 118023 (-)
Gene ID: HRGMv2_2819_29_121
Type: STP
Location: 118354 - 119517 (+)
Gene ID: HRGMv2_2819_29_122
Type: TC
Location: 119909 - 122092 (+)
Gene ID: HRGMv2_2819_29_123
Type: TC
Location: 122264 - 123589 (-)
Gene ID: HRGMv2_2819_29_124
Type: pfam
Location: 123973 - 124485 (-)
Gene ID: HRGMv2_2819_29_125
Type: TC
Location: 124583 - 125443 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2819_29_124 vegetarian > vegan 1.42928 0.02258

🧭 Explore Read Mapping of CGC

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