Cluster: HRGMv2_2819_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2819
- CGC Family ID: CGCFAM_00266
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2819_21 | HRGMv2_2819_21_43 | 42329 | 44107 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_2819_21 | HRGMv2_2819_21_44 | 44159 | 44962 | + | GT2 |
| peptidase | HRGMv2_2819_21 | HRGMv2_2819_21_45 | 45131 | 46180 | + | M42.UPW |
| pfam | HRGMv2_2819_21 | HRGMv2_2819_21_46 | 46188 | 46793 | + | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_8 |
| TC | HRGMv2_2819_21 | HRGMv2_2819_21_47 | 46848 | 47912 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_2819_21_43
Type: TC
Location: 42329 - 44107 (+)
Type: TC
Location: 42329 - 44107 (+)
Gene ID: HRGMv2_2819_21_44
Type: CAZyme
Location: 44159 - 44962 (+)
Type: CAZyme
Location: 44159 - 44962 (+)
Gene ID: HRGMv2_2819_21_45
Type: peptidase
Location: 45131 - 46180 (+)
Type: peptidase
Location: 45131 - 46180 (+)
Gene ID: HRGMv2_2819_21_46
Type: pfam
Location: 46188 - 46793 (+)
Type: pfam
Location: 46188 - 46793 (+)
Gene ID: HRGMv2_2819_21_47
Type: TC
Location: 46848 - 47912 (+)
Type: TC
Location: 46848 - 47912 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium merdipullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.