Genome Details
Selected Rep_genome_ID: HRGMv2_2552
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Companilactobacillus
Species
Companilactobacillus formosensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2552 | 2,178,650 | 95.28% | 0.916% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2552_CGC4 | CGCFAM_00027 | Yes | 5 | 1 | |
| HRGMv2_2552_CGC14 | CGCFAM_00243 | Yes | 13 | 2 | host glycan |
| HRGMv2_2552_CGC18 | CGCFAM_01777 | Yes | 10 | 3 | |
| HRGMv2_2552_CGC8 | CGCFAM_01777 | Yes | 12 | 2 | |
| HRGMv2_2552_CGC1 | CGCFAM_02702 | Yes | 14 | 1 | |
| HRGMv2_2552_CGC5 | CGCFAM_05547 | Yes | 5 | 1 | |
| HRGMv2_2552_CGC17 | CGCFAM_06132 | Yes | 8 | 1 | |
| HRGMv2_2552_CGC19 | CGCFAM_06133 | Yes | 9 | 2 | |
| HRGMv2_2552_CGC3 | CGCFAM_06134 | Yes | 6 | 2 | |
| HRGMv2_2552_CGC6 | CGCFAM_06135 | Yes | 17 | 3 | |
| HRGMv2_2552_CGC7 | CGCFAM_09231 | Yes | 7 | 1 | |
| HRGMv2_2552_CGC2 | CGCFAM_10108 | Yes | 18 | 3 | |
| HRGMv2_2552_CGC9 | CGCFAM_10109 | Yes | 9 | 1 |
Top CAZyme Families