Cluster: HRGMv2_2552_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2552
- CGC Family ID: CGCFAM_05547
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2552_5 | HRGMv2_2552_5_21 | 18868 | 20223 | + | 9.A.40.2.1 |
| sulfatase | HRGMv2_2552_5 | HRGMv2_2552_5_22 | 20340 | 21917 | + | S1_97 |
| CAZyme | HRGMv2_2552_5 | HRGMv2_2552_5_23 | 22326 | 23330 | + | GH73 |
| NULL(UNKNOWN) | HRGMv2_2552_5 | HRGMv2_2552_5_24 | 23527 | 26043 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2552_5 | HRGMv2_2552_5_25 | 26144 | 27478 | + | 2.A.26.1.9 |
Gene ID: HRGMv2_2552_5_21
Type: TC
Location: 18868 - 20223 (+)
Type: TC
Location: 18868 - 20223 (+)
Gene ID: HRGMv2_2552_5_22
Type: sulfatase
Location: 20340 - 21917 (+)
Type: sulfatase
Location: 20340 - 21917 (+)
Gene ID: HRGMv2_2552_5_23
Type: CAZyme
Location: 22326 - 23330 (+)
Type: CAZyme
Location: 22326 - 23330 (+)
Gene ID: HRGMv2_2552_5_24
Type:
Location: 23527 - 26043 (+)
Type:
Location: 23527 - 26043 (+)
Gene ID: HRGMv2_2552_5_25
Type: TC
Location: 26144 - 27478 (+)
Type: TC
Location: 26144 - 27478 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Companilactobacillus
Species
Companilactobacillus formosensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.