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Cluster: HRGMv2_2552_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2552_53 HRGMv2_2552_53_2 1985 2725 - 2.A.102.4.12
NULL(UNKNOWN) HRGMv2_2552_53 HRGMv2_2552_53_3 2875 3429 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2552_53 HRGMv2_2552_53_4 3458 4147 - M10.UPA
CAZyme HRGMv2_2552_53 HRGMv2_2552_53_5 4219 5547 - GT2
NULL(UNKNOWN) HRGMv2_2552_53 HRGMv2_2552_53_6 5557 6054 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2552_53 HRGMv2_2552_53_7 6041 6871 - EAL
TC HRGMv2_2552_53 HRGMv2_2552_53_8 7119 9083 + 4.A.1.2.2
peptidase HRGMv2_2552_53 HRGMv2_2552_53_9 9102 9926 + S09.UPW
CAZyme HRGMv2_2552_53 HRGMv2_2552_53_10 10102 11502 - GH4
Gene ID: HRGMv2_2552_53_2
Type: TC
Location: 1985 - 2725 (-)
Gene ID: HRGMv2_2552_53_3
Type:
Location: 2875 - 3429 (+)
Gene ID: HRGMv2_2552_53_4
Type: peptidase
Location: 3458 - 4147 (-)
Gene ID: HRGMv2_2552_53_5
Type: CAZyme
Location: 4219 - 5547 (-)
Gene ID: HRGMv2_2552_53_6
Type:
Location: 5557 - 6054 (-)
Gene ID: HRGMv2_2552_53_7
Type: STP
Location: 6041 - 6871 (-)
Gene ID: HRGMv2_2552_53_8
Type: TC
Location: 7119 - 9083 (+)
Gene ID: HRGMv2_2552_53_9
Type: peptidase
Location: 9102 - 9926 (+)
Gene ID: HRGMv2_2552_53_10
Type: CAZyme
Location: 10102 - 11502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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