Genome Details
Selected Rep_genome_ID: HRGMv2_2195
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdimonas
Species
Merdimonas faecis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR074343 | 2,860,958 | 95.61% | 3.22% | China | Asia | CGMR |
| HRGMv2_2195 | 2,835,154 | 97.66% | 1.169% | South Korea | Asia | HRGM |
| Rep_2018 | 3,102,666 | 97.3684% | 1.75439% | NA | NA | WIS |
| SPMP01_bin.3 | 2,732,785 | 92.3% | 3.14% | Singapore | Asia | SPMP |
| SPMP65_bin.20 | 2,783,880 | 95.24% | 4.24% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2195_CGC8 | CGCFAM_00008 | Yes | 6 | 2 | |
| HRGMv2_2195_CGC19 | CGCFAM_00149 | Yes | 5 | 1 | |
| HRGMv2_2195_CGC6 | CGCFAM_00242 | Yes | 7 | 1 | |
| HRGMv2_2195_CGC17 | CGCFAM_00247 | Yes | 4 | 1 | |
| HRGMv2_2195_CGC18 | CGCFAM_00946 | Yes | 5 | 1 | |
| HRGMv2_2195_CGC14 | CGCFAM_01322 | Yes | 9 | 1 | |
| HRGMv2_2195_CGC2 | CGCFAM_01515 | Yes | 6 | 1 | |
| HRGMv2_2195_CGC20 | CGCFAM_01694 | Yes | 8 | 4 | |
| HRGMv2_2195_CGC9 | CGCFAM_01724 | Yes | 7 | 2 | |
| HRGMv2_2195_CGC22 | CGCFAM_02164 | Yes | 8 | 2 | |
| HRGMv2_2195_CGC16 | CGCFAM_02412 | Yes | 16 | 9 | |
| HRGMv2_2195_CGC13 | CGCFAM_04916 | Yes | 4 | 1 | |
| HRGMv2_2195_CGC4 | CGCFAM_07533 | Yes | 9 | 1 | |
| HRGMv2_2195_CGC3 | CGCFAM_09985 | Yes | 3 | 1 |
Top CAZyme Families