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Cluster: HRGMv2_2195_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2195_5 HRGMv2_2195_5_104 102290 104290 - 9.A.8.1.6
STP HRGMv2_2195_5 HRGMv2_2195_5_105 104385 104597 - FeoA
TF HRGMv2_2195_5 HRGMv2_2195_5_106 104823 105188 + Fe_dep_repress
CAZyme HRGMv2_2195_5 HRGMv2_2195_5_107 105381 106811 + CE4
TC HRGMv2_2195_5 HRGMv2_2195_5_108 106859 108211 + 2.A.66.1.32
STP HRGMv2_2195_5 HRGMv2_2195_5_109 108143 108730 - TetR_N
CAZyme HRGMv2_2195_5 HRGMv2_2195_5_110 108866 110674 + GH13_9
Gene ID: HRGMv2_2195_5_104
Type: TC
Location: 102290 - 104290 (-)
Gene ID: HRGMv2_2195_5_105
Type: STP
Location: 104385 - 104597 (-)
Gene ID: HRGMv2_2195_5_106
Type: TF
Location: 104823 - 105188 (+)
Gene ID: HRGMv2_2195_5_107
Type: CAZyme
Location: 105381 - 106811 (+)
Gene ID: HRGMv2_2195_5_108
Type: TC
Location: 106859 - 108211 (+)
Gene ID: HRGMv2_2195_5_109
Type: STP
Location: 108143 - 108730 (-)
Gene ID: HRGMv2_2195_5_110
Type: CAZyme
Location: 108866 - 110674 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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