Cluster: HRGMv2_2195_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2195
- CGC Family ID: CGCFAM_09985
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2195_3 | HRGMv2_2195_3_88 | 87198 | 88706 | + | 4.C.1.1.4 |
| pfam | HRGMv2_2195_3 | HRGMv2_2195_3_89 | 88764 | 89999 | - | MFS_1 | MFS_1 |
| CAZyme | HRGMv2_2195_3 | HRGMv2_2195_3_90 | 89981 | 92062 | - | GH31_1 |
Gene ID: HRGMv2_2195_3_88
Type: TC
Location: 87198 - 88706 (+)
Type: TC
Location: 87198 - 88706 (+)
Gene ID: HRGMv2_2195_3_89
Type: pfam
Location: 88764 - 89999 (-)
Type: pfam
Location: 88764 - 89999 (-)
Gene ID: HRGMv2_2195_3_90
Type: CAZyme
Location: 89981 - 92062 (-)
Type: CAZyme
Location: 89981 - 92062 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdimonas
Species
Merdimonas faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.