Cluster: HRGMv2_2195_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2195
- CGC Family ID: CGCFAM_04916
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2195_13 | HRGMv2_2195_13_1 | 167 | 1516 | + | 2.A.66.1.28 |
| NULL(UNKNOWN) | HRGMv2_2195_13 | HRGMv2_2195_13_2 | 1471 | 1590 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2195_13 | HRGMv2_2195_13_3 | 1616 | 2074 | - | DUF1307 |
| CAZyme | HRGMv2_2195_13 | HRGMv2_2195_13_4 | 2317 | 3624 | + | GH13_20 |
Gene ID: HRGMv2_2195_13_1
Type: TC
Location: 167 - 1516 (+)
Type: TC
Location: 167 - 1516 (+)
Gene ID: HRGMv2_2195_13_2
Type:
Location: 1471 - 1590 (+)
Type:
Location: 1471 - 1590 (+)
Gene ID: HRGMv2_2195_13_3
Type: pfam
Location: 1616 - 2074 (-)
Type: pfam
Location: 1616 - 2074 (-)
Gene ID: HRGMv2_2195_13_4
Type: CAZyme
Location: 2317 - 3624 (+)
Type: CAZyme
Location: 2317 - 3624 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdimonas
Species
Merdimonas faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.