Cluster: HRGMv2_2195_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2195
- CGC Family ID: CGCFAM_01515
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2195_1 | HRGMv2_2195_1_187 | 202843 | 205302 | + | 3.A.7.14.2 |
| NULL(UNKNOWN) | HRGMv2_2195_1 | HRGMv2_2195_1_188 | 205299 | 207455 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2195_1 | HRGMv2_2195_1_189 | 207452 | 208453 | + | GH23 |
| pfam | HRGMv2_2195_1 | HRGMv2_2195_1_190 | 208475 | 209380 | + | TpcC |
| NULL(UNKNOWN) | HRGMv2_2195_1 | HRGMv2_2195_1_191 | 210016 | 210732 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2195_1 | HRGMv2_2195_1_192 | 210717 | 211412 | + | 3.A.1.148.3 |
Gene ID: HRGMv2_2195_1_187
Type: TC
Location: 202843 - 205302 (+)
Type: TC
Location: 202843 - 205302 (+)
Gene ID: HRGMv2_2195_1_188
Type:
Location: 205299 - 207455 (+)
Type:
Location: 205299 - 207455 (+)
Gene ID: HRGMv2_2195_1_189
Type: CAZyme
Location: 207452 - 208453 (+)
Type: CAZyme
Location: 207452 - 208453 (+)
Gene ID: HRGMv2_2195_1_190
Type: pfam
Location: 208475 - 209380 (+)
Type: pfam
Location: 208475 - 209380 (+)
Gene ID: HRGMv2_2195_1_191
Type:
Location: 210016 - 210732 (+)
Type:
Location: 210016 - 210732 (+)
Gene ID: HRGMv2_2195_1_192
Type: TC
Location: 210717 - 211412 (+)
Type: TC
Location: 210717 - 211412 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdimonas
Species
Merdimonas faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.