Cluster: HRGMv2_2195_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2195
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2195_4 | HRGMv2_2195_4_134 | 141707 | 143110 | - | 9.B.18.1.1 |
| CAZyme | HRGMv2_2195_4 | HRGMv2_2195_4_135 | 143239 | 144192 | - | GT2 |
| CAZyme | HRGMv2_2195_4 | HRGMv2_2195_4_136 | 144202 | 146019 | - | GT2 | GT2 |
| pfam | HRGMv2_2195_4 | HRGMv2_2195_4_137 | 146023 | 147969 | - | RgpF |
| TC | HRGMv2_2195_4 | HRGMv2_2195_4_138 | 148005 | 148739 | - | 3.A.1.103.1 |
| TC | HRGMv2_2195_4 | HRGMv2_2195_4_139 | 148751 | 149527 | - | 3.A.1.103.6 |
Gene ID: HRGMv2_2195_4_134
Type: TC
Location: 141707 - 143110 (-)
Type: TC
Location: 141707 - 143110 (-)
Gene ID: HRGMv2_2195_4_135
Type: CAZyme
Location: 143239 - 144192 (-)
Type: CAZyme
Location: 143239 - 144192 (-)
Gene ID: HRGMv2_2195_4_136
Type: CAZyme
Location: 144202 - 146019 (-)
Type: CAZyme
Location: 144202 - 146019 (-)
Gene ID: HRGMv2_2195_4_137
Type: pfam
Location: 146023 - 147969 (-)
Type: pfam
Location: 146023 - 147969 (-)
Gene ID: HRGMv2_2195_4_138
Type: TC
Location: 148005 - 148739 (-)
Type: TC
Location: 148005 - 148739 (-)
Gene ID: HRGMv2_2195_4_139
Type: TC
Location: 148751 - 149527 (-)
Type: TC
Location: 148751 - 149527 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdimonas
Species
Merdimonas faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.