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Cluster: HRGMv2_2195_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2195_41 HRGMv2_2195_41_1 192 1910 - GH13_31
TC HRGMv2_2195_41 HRGMv2_2195_41_2 2013 2975 - 3.A.1.5.20
TC HRGMv2_2195_41 HRGMv2_2195_41_3 2976 4001 - 3.A.1.5.2
TC HRGMv2_2195_41 HRGMv2_2195_41_4 4018 4941 - 3.A.1.5.2
TC HRGMv2_2195_41 HRGMv2_2195_41_5 4951 5877 - 3.A.1.5.2
TC HRGMv2_2195_41 HRGMv2_2195_41_6 5982 7616 - 3.A.1.5.19
peptidase HRGMv2_2195_41 HRGMv2_2195_41_7 7669 8742 - M24.UPB
CAZyme HRGMv2_2195_41 HRGMv2_2195_41_8 8761 10656 - GH146
Gene ID: HRGMv2_2195_41_1
Type: CAZyme
Location: 192 - 1910 (-)
Gene ID: HRGMv2_2195_41_2
Type: TC
Location: 2013 - 2975 (-)
Gene ID: HRGMv2_2195_41_3
Type: TC
Location: 2976 - 4001 (-)
Gene ID: HRGMv2_2195_41_4
Type: TC
Location: 4018 - 4941 (-)
Gene ID: HRGMv2_2195_41_5
Type: TC
Location: 4951 - 5877 (-)
Gene ID: HRGMv2_2195_41_6
Type: TC
Location: 5982 - 7616 (-)
Gene ID: HRGMv2_2195_41_7
Type: peptidase
Location: 7669 - 8742 (-)
Gene ID: HRGMv2_2195_41_8
Type: CAZyme
Location: 8761 - 10656 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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