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Cluster: HRGMv2_2195_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2195_18 HRGMv2_2195_18_21 18862 20301 + 8.A.3.1.2
TC HRGMv2_2195_18 HRGMv2_2195_18_22 20298 21806 + 8.A.3.1.2
pfam HRGMv2_2195_18 HRGMv2_2195_18_23 21819 22799 + LytR_cpsA_psr
TC HRGMv2_2195_18 HRGMv2_2195_18_24 22832 24718 + 9.B.18.2.1
TC HRGMv2_2195_18 HRGMv2_2195_18_25 24715 25404 + 9.B.18.1.2
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_26 25397 26548 + GT4
TC HRGMv2_2195_18 HRGMv2_2195_18_27 26524 27633 + 9.B.183.1.9
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_28 27684 28748 + GT2
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_29 28761 29579 + GT2
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_30 29594 30301 + GT32
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_31 30298 31500 + GT4
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_32 31660 32664 + GT2
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_33 32676 33704 + GT2
pfam HRGMv2_2195_18 HRGMv2_2195_18_34 33682 34848 + PS_pyruv_trans
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_35 34849 35829 + GT2
CAZyme HRGMv2_2195_18 HRGMv2_2195_18_36 35839 36795 + GT2
Gene ID: HRGMv2_2195_18_21
Type: TC
Location: 18862 - 20301 (+)
Gene ID: HRGMv2_2195_18_22
Type: TC
Location: 20298 - 21806 (+)
Gene ID: HRGMv2_2195_18_23
Type: pfam
Location: 21819 - 22799 (+)
Gene ID: HRGMv2_2195_18_24
Type: TC
Location: 22832 - 24718 (+)
Gene ID: HRGMv2_2195_18_25
Type: TC
Location: 24715 - 25404 (+)
Gene ID: HRGMv2_2195_18_26
Type: CAZyme
Location: 25397 - 26548 (+)
Gene ID: HRGMv2_2195_18_27
Type: TC
Location: 26524 - 27633 (+)
Gene ID: HRGMv2_2195_18_28
Type: CAZyme
Location: 27684 - 28748 (+)
Gene ID: HRGMv2_2195_18_29
Type: CAZyme
Location: 28761 - 29579 (+)
Gene ID: HRGMv2_2195_18_30
Type: CAZyme
Location: 29594 - 30301 (+)
Gene ID: HRGMv2_2195_18_31
Type: CAZyme
Location: 30298 - 31500 (+)
Gene ID: HRGMv2_2195_18_32
Type: CAZyme
Location: 31660 - 32664 (+)
Gene ID: HRGMv2_2195_18_33
Type: CAZyme
Location: 32676 - 33704 (+)
Gene ID: HRGMv2_2195_18_34
Type: pfam
Location: 33682 - 34848 (+)
Gene ID: HRGMv2_2195_18_35
Type: CAZyme
Location: 34849 - 35829 (+)
Gene ID: HRGMv2_2195_18_36
Type: CAZyme
Location: 35839 - 36795 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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