Cluster: HRGMv2_2195_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2195
- CGC Family ID: CGCFAM_00242
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2195_4 | HRGMv2_2195_4_16 | 21020 | 23182 | - | GH112 |
| pfam | HRGMv2_2195_4 | HRGMv2_2195_4_17 | 23211 | 23378 | - | DUF6903 |
| TC | HRGMv2_2195_4 | HRGMv2_2195_4_18 | 23394 | 24266 | - | 3.A.1.1.18 |
| TC | HRGMv2_2195_4 | HRGMv2_2195_4_19 | 24286 | 25176 | - | 3.A.1.1.41 |
| STP | HRGMv2_2195_4 | HRGMv2_2195_4_20 | 25258 | 26631 | - | SBP_bac_1 |
| sulfatase | HRGMv2_2195_4 | HRGMv2_2195_4_21 | 26940 | 28136 | - | S1_7 |
| TC | HRGMv2_2195_4 | HRGMv2_2195_4_22 | 28181 | 30073 | - | 1.A.33.1.4 |
Gene ID: HRGMv2_2195_4_16
Type: CAZyme
Location: 21020 - 23182 (-)
Type: CAZyme
Location: 21020 - 23182 (-)
Gene ID: HRGMv2_2195_4_17
Type: pfam
Location: 23211 - 23378 (-)
Type: pfam
Location: 23211 - 23378 (-)
Gene ID: HRGMv2_2195_4_18
Type: TC
Location: 23394 - 24266 (-)
Type: TC
Location: 23394 - 24266 (-)
Gene ID: HRGMv2_2195_4_19
Type: TC
Location: 24286 - 25176 (-)
Type: TC
Location: 24286 - 25176 (-)
Gene ID: HRGMv2_2195_4_20
Type: STP
Location: 25258 - 26631 (-)
Type: STP
Location: 25258 - 26631 (-)
Gene ID: HRGMv2_2195_4_21
Type: sulfatase
Location: 26940 - 28136 (-)
Type: sulfatase
Location: 26940 - 28136 (-)
Gene ID: HRGMv2_2195_4_22
Type: TC
Location: 28181 - 30073 (-)
Type: TC
Location: 28181 - 30073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdimonas
Species
Merdimonas faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.