Cluster: HRGMv2_2195_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2195
- CGC Family ID: CGCFAM_00946
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2195_20 | HRGMv2_2195_20_23 | 23618 | 24916 | + | 3.A.1.121.4 |
| TC | HRGMv2_2195_20 | HRGMv2_2195_20_24 | 24993 | 26645 | - | 8.A.7.1.1 |
| STP | HRGMv2_2195_20 | HRGMv2_2195_20_25 | 26678 | 26935 | - | PTS-HPr |
| CAZyme | HRGMv2_2195_20 | HRGMv2_2195_20_26 | 26968 | 28620 | - | GH13_29 |
| TC | HRGMv2_2195_20 | HRGMv2_2195_20_27 | 28632 | 30575 | - | 4.A.1.2.13 |
Gene ID: HRGMv2_2195_20_23
Type: TC
Location: 23618 - 24916 (+)
Type: TC
Location: 23618 - 24916 (+)
Gene ID: HRGMv2_2195_20_24
Type: TC
Location: 24993 - 26645 (-)
Type: TC
Location: 24993 - 26645 (-)
Gene ID: HRGMv2_2195_20_25
Type: STP
Location: 26678 - 26935 (-)
Type: STP
Location: 26678 - 26935 (-)
Gene ID: HRGMv2_2195_20_26
Type: CAZyme
Location: 26968 - 28620 (-)
Type: CAZyme
Location: 26968 - 28620 (-)
Gene ID: HRGMv2_2195_20_27
Type: TC
Location: 28632 - 30575 (-)
Type: TC
Location: 28632 - 30575 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Merdimonas
Species
Merdimonas faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.