dbCAN Logo

Cluster: HRGMv2_2195_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2195_13 HRGMv2_2195_13_23 22473 23507 - 3.A.1.2.3
STP HRGMv2_2195_13 HRGMv2_2195_13_24 23539 24537 - Peripla_BP_1
TC HRGMv2_2195_13 HRGMv2_2195_13_25 24497 26365 - 8.A.59.2.1
TF HRGMv2_2195_13 HRGMv2_2195_13_26 26355 27965 - HTH_AraC | HTH_AraC
TC HRGMv2_2195_13 HRGMv2_2195_13_27 28133 29788 - 3.A.1.2.3
TC HRGMv2_2195_13 HRGMv2_2195_13_28 29807 31315 - 3.A.1.2.3
pfam HRGMv2_2195_13 HRGMv2_2195_13_29 31430 32719 - Peripla_BP_4 | Peripla_BP_7
pfam HRGMv2_2195_13 HRGMv2_2195_13_30 32912 33649 - DUF5714
CAZyme HRGMv2_2195_13 HRGMv2_2195_13_31 33649 34827 - CE9
Gene ID: HRGMv2_2195_13_23
Type: TC
Location: 22473 - 23507 (-)
Gene ID: HRGMv2_2195_13_24
Type: STP
Location: 23539 - 24537 (-)
Gene ID: HRGMv2_2195_13_25
Type: TC
Location: 24497 - 26365 (-)
Gene ID: HRGMv2_2195_13_26
Type: TF
Location: 26355 - 27965 (-)
Gene ID: HRGMv2_2195_13_27
Type: TC
Location: 28133 - 29788 (-)
Gene ID: HRGMv2_2195_13_28
Type: TC
Location: 29807 - 31315 (-)
Gene ID: HRGMv2_2195_13_29
Type: pfam
Location: 31430 - 32719 (-)
Gene ID: HRGMv2_2195_13_30
Type: pfam
Location: 32912 - 33649 (-)
Gene ID: HRGMv2_2195_13_31
Type: CAZyme
Location: 33649 - 34827 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List