Genome Details
Selected Rep_genome_ID: HRGMv2_2121
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| BF043_bin.106_sub | 2,539,328 | 93.74% | 0.34% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_2121 | 2,885,457 | 98.99% | 0% | Tanzania | Africa | HRGM |
| KY038_11 | 2,546,067 | 98.49% | 2.39% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2121_CGC26 | CGCFAM_00075 | Yes | 5 | 2 | |
| HRGMv2_2121_CGC32 | CGCFAM_00253 | Yes | 16 | 5 | |
| HRGMv2_2121_CGC6 | CGCFAM_00833 | Yes | 5 | 1 | |
| HRGMv2_2121_CGC37 | CGCFAM_01229 | Yes | 6 | 1 | |
| HRGMv2_2121_CGC30 | CGCFAM_01231 | Yes | 7 | 2 | |
| HRGMv2_2121_CGC10 | CGCFAM_01232 | Yes | 6 | 1 | |
| HRGMv2_2121_CGC9 | CGCFAM_01490 | Yes | 5 | 1 | beta-mannan |
| PUL0636_HRGMv2_2121_C2 | CGCFAM_02921 | Yes | 9 | 1 | fructan |
| HRGMv2_2121_CGC29 | CGCFAM_03420 | Yes | 7 | 1 | |
| HRGMv2_2121_CGC16 | CGCFAM_03427 | Yes | 3 | 1 | |
| HRGMv2_2121_CGC33 | CGCFAM_05803 | Yes | 12 | 1 | |
| HRGMv2_2121_CGC20 | CGCFAM_09964 | Yes | 3 | 1 | |
| HRGMv2_2121_CGC39 | CGCFAM_09965 | Yes | 10 | 2 |
Top CAZyme Families