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Cluster: HRGMv2_2121_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2121_13 HRGMv2_2121_13_31 40272 41120 - 9.B.28.1.3
STP HRGMv2_2121_13 HRGMv2_2121_13_32 41426 42736 + SBP_bac_1
TC HRGMv2_2121_13 HRGMv2_2121_13_33 42854 43900 + 3.A.1.1.17
TC HRGMv2_2121_13 HRGMv2_2121_13_34 43916 44758 + 3.A.1.1.36
NULL(UNKNOWN) HRGMv2_2121_13 HRGMv2_2121_13_35 44875 45561 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2121_13 HRGMv2_2121_13_36 45589 47778 + GH36
TC HRGMv2_2121_13 HRGMv2_2121_13_37 47992 49380 - 2.A.66.1.33
Gene ID: HRGMv2_2121_13_31
Type: TC
Location: 40272 - 41120 (-)
Gene ID: HRGMv2_2121_13_32
Type: STP
Location: 41426 - 42736 (+)
Gene ID: HRGMv2_2121_13_33
Type: TC
Location: 42854 - 43900 (+)
Gene ID: HRGMv2_2121_13_34
Type: TC
Location: 43916 - 44758 (+)
Gene ID: HRGMv2_2121_13_35
Type:
Location: 44875 - 45561 (+)
Gene ID: HRGMv2_2121_13_36
Type: CAZyme
Location: 45589 - 47778 (+)
Gene ID: HRGMv2_2121_13_37
Type: TC
Location: 47992 - 49380 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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