Cluster: HRGMv2_2121_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2121
- CGC Family ID: CGCFAM_09964
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2121_10 | HRGMv2_2121_10_46 | 46722 | 48599 | + | GH13_9 |
| TC | HRGMv2_2121_10 | HRGMv2_2121_10_47 | 48899 | 50455 | + | 3.A.1.120.6 |
| TC | HRGMv2_2121_10 | HRGMv2_2121_10_48 | 50780 | 51529 | + | 2.A.115.2.9 |
Gene ID: HRGMv2_2121_10_46
Type: CAZyme
Location: 46722 - 48599 (+)
Type: CAZyme
Location: 46722 - 48599 (+)
Gene ID: HRGMv2_2121_10_47
Type: TC
Location: 48899 - 50455 (+)
Type: TC
Location: 48899 - 50455 (+)
Gene ID: HRGMv2_2121_10_48
Type: TC
Location: 50780 - 51529 (+)
Type: TC
Location: 50780 - 51529 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp029338615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.