dbCAN Logo

Cluster: HRGMv2_2121_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2121_16 HRGMv2_2121_16_6 4300 5103 + 8.A.3.2.3
TC HRGMv2_2121_16 HRGMv2_2121_16_7 5100 5852 + 8.A.3.2.3
NULL(UNKNOWN) HRGMv2_2121_16 HRGMv2_2121_16_8 5961 6746 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2121_16 HRGMv2_2121_16_9 6986 8437 + 9.B.18.1.2
STP HRGMv2_2121_16 HRGMv2_2121_16_10 8460 9770 + AraC_binding
CAZyme HRGMv2_2121_16 HRGMv2_2121_16_11 9818 10558 + GT26
CAZyme HRGMv2_2121_16 HRGMv2_2121_16_12 10580 11683 + GT4
pfam HRGMv2_2121_16 HRGMv2_2121_16_13 11699 12271 + Hexapep | Hexapep_2
pfam HRGMv2_2121_16 HRGMv2_2121_16_14 12286 13404 + Glycos_transf_1 | Glyco_trans_1_4
CAZyme HRGMv2_2121_16 HRGMv2_2121_16_15 13428 14417 + GT2
NULL(UNKNOWN) HRGMv2_2121_16 HRGMv2_2121_16_16 14410 15561 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2121_16 HRGMv2_2121_16_17 15569 16507 + GT2
pfam HRGMv2_2121_16 HRGMv2_2121_16_18 16537 17676 + PS_pyruv_trans
TC HRGMv2_2121_16 HRGMv2_2121_16_19 17696 19246 + 2.A.66.1.40
pfam HRGMv2_2121_16 HRGMv2_2121_16_20 19259 20479 + FrhB_FdhB_N | FrhB_FdhB_C | Fer4_7 | Fer4_9
CAZyme HRGMv2_2121_16 HRGMv2_2121_16_21 20497 21585 + GT2
Gene ID: HRGMv2_2121_16_6
Type: TC
Location: 4300 - 5103 (+)
Gene ID: HRGMv2_2121_16_7
Type: TC
Location: 5100 - 5852 (+)
Gene ID: HRGMv2_2121_16_8
Type:
Location: 5961 - 6746 (+)
Gene ID: HRGMv2_2121_16_9
Type: TC
Location: 6986 - 8437 (+)
Gene ID: HRGMv2_2121_16_10
Type: STP
Location: 8460 - 9770 (+)
Gene ID: HRGMv2_2121_16_11
Type: CAZyme
Location: 9818 - 10558 (+)
Gene ID: HRGMv2_2121_16_12
Type: CAZyme
Location: 10580 - 11683 (+)
Gene ID: HRGMv2_2121_16_13
Type: pfam
Location: 11699 - 12271 (+)
Gene ID: HRGMv2_2121_16_14
Type: pfam
Location: 12286 - 13404 (+)
Gene ID: HRGMv2_2121_16_15
Type: CAZyme
Location: 13428 - 14417 (+)
Gene ID: HRGMv2_2121_16_16
Type:
Location: 14410 - 15561 (+)
Gene ID: HRGMv2_2121_16_17
Type: CAZyme
Location: 15569 - 16507 (+)
Gene ID: HRGMv2_2121_16_18
Type: pfam
Location: 16537 - 17676 (+)
Gene ID: HRGMv2_2121_16_19
Type: TC
Location: 17696 - 19246 (+)
Gene ID: HRGMv2_2121_16_20
Type: pfam
Location: 19259 - 20479 (+)
Gene ID: HRGMv2_2121_16_21
Type: CAZyme
Location: 20497 - 21585 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2121_16_7 vegan > omnivore 1.23276 0.04796
HRGMv2_2121_16_7 vegetarian > omnivore 1.28968 0.00565
HRGMv2_2121_16_10 vegan > omnivore 1.66303 0.04796
HRGMv2_2121_16_10 vegetarian > omnivore 1.40498 0.00565
HRGMv2_2121_16_16 vegan > omnivore 4.32322 0.03483
HRGMv2_2121_16_16 vegetarian > omnivore 3.60089 0.00565
HRGMv2_2121_16_18 vegetarian > omnivore 14.33145 0.00565
HRGMv2_2121_16_18 vegan > omnivore 15.93845 0.01332
HRGMv2_2121_16_19 vegetarian > omnivore 14.56029 0.00565
HRGMv2_2121_16_19 vegan > omnivore 15.53884 0.01478
HRGMv2_2121_16_20 vegetarian > omnivore 15.19181 0.00565
HRGMv2_2121_16_20 vegan > omnivore 16.02561 0.01478

🧭 Explore Read Mapping of CGC

← Back to Cluster List