PROTEIN: HRGMv2_2121_16_8
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Protein File & Metadata
Source:
HRGMv2_2121_16_8.pdb
Genome ID:
Protein ID:
HRGMv2_2121_16_8
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Protein Sequence
MRKFKKALAV ALSVAMMVPT VAFAAESPAK VDVNGAKFNK TSLSYTAKAQ KPSITVNGKT 60 LVYGKDFTVK SGRLTQKAAG TYKVTIAGIG SYTGTKTLTY TIKKAAQSKV KAVAKAKTYN 120 GKKQMTSVKV SFNGVALKKG VDYTIAKSSV VKATNAGKYT VKVVGKGNFT GTKTITYTIK 180 KAAQSKAKFA VNSAKKKVAV SGIKAKAKVT YTTNNKKVSV KNGKIIVKKG VKKGTKVTIT 240 AKIASTKNYA AKTIKKTYVV K 261
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UWP58337.1 | CBM13 | 11 | 261 | 964 | 1260 | 0.3784 |
0.6713 |
| AF-D9ZF69-F1-model_v4 | GH5_4 | 22 | 261 | 436 | 725 | 0.3555 |
0.5962 |
| AF-W0U2W9-F1-model_v4 | GH5_4 | 22 | 261 | 448 | 736 | 0.3528 |
0.5897 |
| AF-A0A7T3QX57-F1-model_v4 | GH5_4 | 33 | 261 | 4 | 502 | 0.3501 |
0.5406 |
| AF-E6UG86-F1-model_v4 | GH5_4 | 48 | 261 | 27 | 536 | 0.3472 |
0.5768 |
| AF-Q9LCC5-F1-model_v4 | GH5_4 | 48 | 261 | 27 | 537 | 0.3461 |
0.5761 |
| A0A415DYD5 | GH25 | 32 | 252 | 268 | 491 | 0.3367 |
0.5701 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.