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Cluster: HRGMv2_2121_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2121_13 HRGMv2_2121_13_43 69762 71480 + 2.A.25.1.3
TC HRGMv2_2121_13 HRGMv2_2121_13_44 71685 73445 + 1.A.33.1.4
NULL(UNKNOWN) HRGMv2_2121_13 HRGMv2_2121_13_45 73470 73865 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2121_13 HRGMv2_2121_13_46 73920 74819 + 1.E.12.1.3
pfam HRGMv2_2121_13 HRGMv2_2121_13_47 74823 75623 + DnaJ
CAZyme HRGMv2_2121_13 HRGMv2_2121_13_48 75920 78367 + GT35
CAZyme HRGMv2_2121_13 HRGMv2_2121_13_49 78686 79756 + GH5_2
Gene ID: HRGMv2_2121_13_43
Type: TC
Location: 69762 - 71480 (+)
Gene ID: HRGMv2_2121_13_44
Type: TC
Location: 71685 - 73445 (+)
Gene ID: HRGMv2_2121_13_45
Type:
Location: 73470 - 73865 (+)
Gene ID: HRGMv2_2121_13_46
Type: TC
Location: 73920 - 74819 (+)
Gene ID: HRGMv2_2121_13_47
Type: pfam
Location: 74823 - 75623 (+)
Gene ID: HRGMv2_2121_13_48
Type: CAZyme
Location: 75920 - 78367 (+)
Gene ID: HRGMv2_2121_13_49
Type: CAZyme
Location: 78686 - 79756 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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