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Cluster: HRGMv2_2121_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2121_27 HRGMv2_2121_27_17 19684 21102 - 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_2121_27 HRGMv2_2121_27_18 21265 21369 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2121_27 HRGMv2_2121_27_19 21584 22438 + ROK
CAZyme HRGMv2_2121_27 HRGMv2_2121_27_20 22494 23471 - GT2
CAZyme HRGMv2_2121_27 HRGMv2_2121_27_21 23483 24631 - GT2
pfam HRGMv2_2121_27 HRGMv2_2121_27_22 24763 25599 - BacA
pfam HRGMv2_2121_27 HRGMv2_2121_27_23 25764 26285 - UDG
TC HRGMv2_2121_27 HRGMv2_2121_27_24 26562 27884 + 2.A.22.5.2
NULL(UNKNOWN) HRGMv2_2121_27 HRGMv2_2121_27_25 27989 28282 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2121_27 HRGMv2_2121_27_26 28266 29303 - 4.D.2.1.5
Gene ID: HRGMv2_2121_27_17
Type: TC
Location: 19684 - 21102 (-)
Gene ID: HRGMv2_2121_27_18
Type:
Location: 21265 - 21369 (-)
Gene ID: HRGMv2_2121_27_19
Type: pfam
Location: 21584 - 22438 (+)
Gene ID: HRGMv2_2121_27_20
Type: CAZyme
Location: 22494 - 23471 (-)
Gene ID: HRGMv2_2121_27_21
Type: CAZyme
Location: 23483 - 24631 (-)
Gene ID: HRGMv2_2121_27_22
Type: pfam
Location: 24763 - 25599 (-)
Gene ID: HRGMv2_2121_27_23
Type: pfam
Location: 25764 - 26285 (-)
Gene ID: HRGMv2_2121_27_24
Type: TC
Location: 26562 - 27884 (+)
Gene ID: HRGMv2_2121_27_25
Type:
Location: 27989 - 28282 (-)
Gene ID: HRGMv2_2121_27_26
Type: TC
Location: 28266 - 29303 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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