Cluster: HRGMv2_2121_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2121
- CGC Family ID: CGCFAM_00833
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2121_3 | HRGMv2_2121_3_29 | 32888 | 34336 | - | GH32 |
| TC | HRGMv2_2121_3 | HRGMv2_2121_3_30 | 34359 | 34790 | - | 3.A.1.1.28 |
| TC | HRGMv2_2121_3 | HRGMv2_2121_3_31 | 34882 | 35556 | - | 3.A.2.2.2 |
| TC | HRGMv2_2121_3 | HRGMv2_2121_3_32 | 35685 | 37055 | - | 3.A.2.2.2 |
| TC | HRGMv2_2121_3 | HRGMv2_2121_3_33 | 37060 | 38823 | - | 3.A.2.3.2 |
Gene ID: HRGMv2_2121_3_29
Type: CAZyme
Location: 32888 - 34336 (-)
Type: CAZyme
Location: 32888 - 34336 (-)
Gene ID: HRGMv2_2121_3_30
Type: TC
Location: 34359 - 34790 (-)
Type: TC
Location: 34359 - 34790 (-)
Gene ID: HRGMv2_2121_3_31
Type: TC
Location: 34882 - 35556 (-)
Type: TC
Location: 34882 - 35556 (-)
Gene ID: HRGMv2_2121_3_32
Type: TC
Location: 35685 - 37055 (-)
Type: TC
Location: 35685 - 37055 (-)
Gene ID: HRGMv2_2121_3_33
Type: TC
Location: 37060 - 38823 (-)
Type: TC
Location: 37060 - 38823 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp029338615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.